# Axon Agentic — Verified Claims Manifest
# https://axonagentic.ai/research/claims.yaml
#
# Every quantitative or factual claim on Axon Agentic's public-facing
# pages is recorded here with its source citation and verification status.
# Verification is performed by Veritas, an independent verification agent.
#
# Schema: 1.0
# Format: YAML 1.2
# Updated automatically on every build.

generated_at: 2026-06-02T12:18:52.811Z
generator_version: 0.1.0
source_commit: 1ec7ff7
schema_version: "1.0"
claims:
  - id: CLM-DRAFT-001
    aida: Jonathan Agoot is the sole human operator of Axon Agentic.
    text: Axon Agentic is a one-person company. The one person is Jonathan Agoot, who founded it, operates it, and is responsible for everything it publishes.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic operator and accountability policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-002a
    aida: Amara is an AI agent, not a human.
    text: AI agent, not a human. Amara is a Marketing AI agent operated by Jonathan Agoot at Axon Agentic.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent operating profile: Amara (Marketing AI agent)."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-002b
    aida: Astro is an AI agent, not a human.
    text: AI agent, not a human. Astro is an Engineering AI agent operated by Jonathan Agoot at Axon Agentic.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent operating profile: Astro (Engineering AI agent)."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-002c
    aida: Kiran is an AI agent, not a human.
    text: AI agent, not a human. Kiran is a Product AI agent operated by Jonathan Agoot at Axon Agentic.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent operating profile: Kiran (Product AI agent)."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-002d
    aida: Veritas is an AI agent, not a human.
    text: AI agent, not a human. Veritas is a Verification AI agent operated by Jonathan Agoot at Axon Agentic.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent operating profile: Veritas (Verification AI agent)."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-003
    aida: Every factual claim published by Axon Agentic is verified by Veritas before publication.
    text: Every factual claim any of them produces is independently verified by Veritas before it can be published.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic claims verification pipeline policy: every factual claim produced by an AI agent is independently verified before publication."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-004
    aida: All six Axon Agentic AI agents (Amara, Astro, Kiran, Veritas, Folio, Scout) run on Claude, made by Anthropic.
    text: All six agents run on Claude, made by Anthropic.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent operating profiles: model identity disclosed for all six agents."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-26
    verified_by: veritas
  - id: CLM-DRAFT-005a
    aida: Amara drafts articles, writes internal planning notes, research summaries, and internal team coordination without requiring Jonathan Agoot's approval.
    text: "Automatic: drafting articles, internal planning notes, research summaries, team coordination."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Amara (Marketing AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-005b
    aida: Anything published to the public website, sent to a researcher, or posted on social media by Amara requires Jonathan Agoot's explicit approval.
    text: "Always requires Jonathan Agoot's approval: anything published to the public website, sent to a researcher, or posted on social media. Amara does not press 'publish' on anything."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Amara (Marketing AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-005c
    aida: Amara cannot approve its own factual claims or skip the Veritas verification step.
    text: No agent can approve its own facts or route around the verification step.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Amara (Marketing AI agent) verification dependency policy: agents cannot self-approve factual claims or bypass the verification step."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-007a
    aida: Astro writes code and fixes bugs without requiring Jonathan Agoot's approval. Internal deployment workflow details are not publicly disclosed.
    text: "Automatic: writing code, fixing bugs."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Astro (Engineering AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-007b
    aida: Publishing to the public website always requires Jonathan Agoot's approval.
    text: "Always requires Jonathan Agoot's approval: publishing to the public website."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Astro (Engineering AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-007c
    aida: Any words or images that appear on the public website require Marketing's approval; Astro does not decide what the site says.
    text: "Always requires Marketing's approval: any words or images that appear on the public site. Astro does not decide what the site says."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Astro (Engineering AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-009a
    aida: Kiran's internal team coordination, internal research notes, and draft analyses happen automatically without requiring Jonathan Agoot's approval.
    text: "Automatic: internal team coordination, internal research notes, draft analyses."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Kiran (Product AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-009b
    aida: Anything published publicly by Kiran — including blog posts, emails, and outreach to researchers — always requires Jonathan Agoot's review.
    text: "Always requires Jonathan Agoot's review: anything published publicly — blog posts, emails, outreach to researchers, this page."
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic Kiran (Product AI agent) autonomy boundaries policy.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-009c
    aida: Kiran cannot approve its own factual claims — all claims destined for publication are independently verified by Veritas.
    text: Kiran cannot approve its own facts.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Kiran (Product AI agent) verification dependency policy: agents cannot self-approve factual claims."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-011a
    aida: Veritas does not share write access on claim *content* fields with the agents that produce content (Amara, Astro, Kiran, Folio). Bounded write access exists for verdict-record fields per the verification protocol policy codified 2026-05-08.
    text: Write access only to its own verification records and reports — Veritas cannot edit content produced by any other agent.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic verification protocol policy codified 2026-05-08, bounding write-access scopes between content-producing agents and the Veritas verification agent. Read+write isolation on the Veritas operating environment; read-only on content repositories for claim content fields, with a bounded write exception on verdict-record fields in claims-manifest files only.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-26
    verified_by: veritas
  - id: CLM-DRAFT-011b
    aida: Veritas verdicts (pass, fail, needs-review) cannot be overridden by other AI agents; override requires Jonathan Agoot's explicit approval, recorded with a written reason.
    text: Verification verdicts — pass, fail, or needs review — are issued automatically and cannot be overridden by other AI agents. Any exception to a Veritas finding requires Jonathan Agoot's explicit approval, recorded with a written reason.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic verdict protocol policy codified 2026-04-07: Veritas verdicts cannot be overridden by other AI agents, and any override requires explicit human-operator approval with a written reason."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-011c
    aida: Manual overrides of Veritas findings require a written rationale and Jonathan Agoot's sign-off, recorded in the claims YAML.
    text: Any exception requires Jonathan Agoot's explicit approval, recorded with a written reason.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic verification protocol rules: Veritas-finding overrides require written rationale and human-operator sign-off, recorded in the claims manifest."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-012a
    aida: Veritas L1 (numerical claim checking) is active.
    text: "Numbers: confirms that reported numbers match what the source actually says (active now)."
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: moderate
    source:
      reference: "Axon Agentic Veritas L1 (numerical claim checking) layer status: active."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-012b
    aida: Veritas L3 (medical/clinical interpretations checking) is active.
    text: "Medical and clinical interpretations: confirms that classifications follow published clinical guidelines (active today)."
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Veritas L3 (medical/clinical interpretations checking) layer status: active. Verification graduation event 2026-04-07."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-012c
    aida: Veritas L2 (biological vocabulary checking, ontological layer) is planned but not yet active.
    text: "Scientific terminology: confirms that terms match accepted scientific vocabularies (planned)."
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Veritas L2 (biological vocabulary, ontological) layer status: planned, not yet active. Stub-only at verification time."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-012d
    aida: Veritas L4 (semantic faithfulness checking) is active, with Jonathan Agoot reviewing edge cases.
    text: "Meaning: confirms that the wording in our content faithfully represents the source's actual finding (active now, with Jonathan Agoot reviewing edge cases)."
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: moderate
    source:
      reference: "Axon Agentic Veritas L4 (semantic faithfulness checking) layer status: active, with human-operator review of edge cases."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-013a
    aida: Veritas does not make publishing decisions; it reports findings and Jonathan Agoot decides what to do with them.
    text: Veritas does not make publishing decisions — it reports findings, and Jonathan Agoot decides what to do with them.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Veritas (Verification AI agent) autonomy boundaries policy: Veritas reports findings and does not make publishing decisions."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-013b
    aida: Veritas never writes, edits, or publishes content.
    text: Veritas never writes, edits, or publishes content — it only verifies.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Veritas (Verification AI agent) operating profile: verification-only role, no content authorship or publication authority."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-014b
    aida: Veritas has write access only to its own verification records and reports; it cannot edit content produced by other agents.
    text: Write access only to its own verification records and reports — Veritas cannot edit content produced by any other agent.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Veritas (Verification AI agent) data-access scope: write access limited to verification records and reports; no write access to content produced by other agents."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-015
    aida: Jonathan Agoot is the human owner accountable for the actions of all six AI agents.
    text: All six agents are accountable to Jonathan Agoot — the sole human operator of Axon Agentic. He is the person responsible for everything the company publishes, no exceptions.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic operator and accountability policy: a single human operator is accountable for all six AI agents and for everything the company publishes."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-26
    verified_by: veritas
  - id: CLM-DRAFT-016
    aida: Only Jonathan Agoot can override a Veritas finding.
    text: Only Jonathan Agoot can override a Veritas finding.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic Veritas accountability policy: only the human operator can override a Veritas finding."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-DRAFT-017
    aida: No Axon Agentic AI agent has access to customer data, personal information, or financial systems.
    text: No agent has access to customer data, personal information, or financial systems. They work only with internal company materials and publicly available information.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent data-access scope policy: no agent has access to customer data, personal information, or financial systems. Absence is enforced by both policy scope constraints and by operational reality — Axon Agentic has no customer data store or financial system at this stage of the company."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-001
    aida: NeuroAutomata uses ESM-2 650M as its default protein language model.
    text: NeuroAutomata uses ESM-2 650M with masked marginal scoring to predict the effects of single amino acid substitutions.
    claim_type: existence
    evidence_type: published_benchmark
    evidence_strength: strong
    source:
      reference: Lin, Z. et al. (2023). Evolutionary-scale prediction of atomic-level protein structure with a language model. Science, 379(6637), 1123–1130.
      doi: 10.1126/science.ade2574
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-002
    aida: NeuroAutomata uses masked marginal scoring to compute ESM-2 mutation effect predictions.
    text: NeuroAutomata uses ESM-2 650M with masked marginal scoring to predict the effects of single amino acid substitutions.
    claim_type: methodological
    evidence_type: published_benchmark
    evidence_strength: strong
    source:
      reference: Meier, J., Rao, R., Verkuil, R., Liu, J., Sercu, T., & Rives, A. (2021). Language models enable zero-shot prediction of the effects of mutations on protein function. NeurIPS, 34, 29287–29303.
      doi: 10.48550/arXiv.2110.07588
      citation_type: uses_method_in
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-003
    aida: ESM-2 650M achieves a mean Spearman rank correlation of 0.414 on the ProteinGym zero-shot substitution benchmark across 217 DMS assays, ranking 45th of 97 models on the live leaderboard.
    text: Published ESM-2 650M ProteinGym aggregate rho = 0.414, rank 45 of 97 models across 217 substitution DMS assays (ProteinGym leaderboard CSV, OATML-Markslab/ProteinGym repository).
    claim_type: quantitative_metric
    evidence_type: published_benchmark
    evidence_strength: strong
    source:
      reference: ProteinGym zero-shot substitution DMS leaderboard, per-model Spearman summary table. The canonical CSV backing the live proteingym.org leaderboard. Notin et al. 2023 NeurIPS introduced the v1.0 217-assay substitution benchmark; the leaderboard CSV reports per-model aggregate Spearman across those 217 assays and is updated as additional models are evaluated.
      citation_type: cites_as_data_source
    metric:
      name: Mean Spearman rank correlation
      symbol: rho
      value: 0.414
      unit: null
      aggregation: mean
      n_samples: 217
      tolerance: 0.5
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-004
    aida: NeuroAutomata's internal validation on a 5-protein subset produced a median Spearman correlation of 0.515 with experimental functional data.
    text: Internal validation (internal benchmark) across five ProteinGym proteins produced a median Spearman correlation of 0.515 with experimental functional data, compared to the published ESM-2 650M ProteinGym aggregate of 0.414 (ProteinGym leaderboard CSV, accessed 2026-05-08).
    claim_type: quantitative_metric
    evidence_type: internal_validation
    evidence_strength: moderate
    source:
      reference: "NeuroAutomata internal validation: 5-protein subset of ProteinGym, median Spearman correlation across the subset. Published in the NeuroAutomata documentation set."
      citation_type: cites_as_data_source
    metric:
      name: Median Spearman rank correlation
      symbol: rho
      value: 0.515
      unit: null
      aggregation: median
      n_samples: 5
      tolerance: 0.5
      comparison:
        baseline_value: 0.414
        baseline_source: CLM-RH-003 (ProteinGym leaderboard CSV, accessed 2026-05-08)
        delta: 0.101
        delta_pct: 24.4
        claimed_delta_pct: 24
        direction: improvement
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-005
    aida: "NeuroAutomata's 5-protein internal validation produced per-protein Spearman correlations of: Beta-lactamase 0.731, PTEN 0.519, BRCA1 (full ProteinGym entry) 0.515, UBC9 0.473, GB1 0.276."
    text: "The highest correlation was Beta-lactamase at 0.731; the lowest was GB1 at 0.276. Other proteins: PTEN 0.519, BRCA1 0.515 (full ProteinGym entry), UBC9 0.473."
    claim_type: existence
    evidence_type: internal_validation
    evidence_strength: moderate
    source:
      reference: "NeuroAutomata internal validation: per-protein Spearman correlations across the 5-protein subset. Published in the NeuroAutomata documentation set (benchmarks and limitations articles)."
      citation_type: cites_as_data_source
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-005b
    aida: The BRCA1 BRCT domain achieves Spearman rho 0.534 (N=1,262, p=9.8×10⁻⁹⁴) against the Findlay 2018 SGE dataset in the NeuroAutomata cancer-VUS analysis.
    text: "BRCA1 BRCT domain alone: rho 0.534 (N=1,262) — a domain-level recomputation from the same Findlay 2018 SGE dataset, not a separate benchmark."
    claim_type: quantitative_metric
    evidence_type: internal_validation
    evidence_strength: moderate
    source:
      reference: "NeuroAutomata cancer-VUS analysis: BRCT domain Spearman correlation recomputed from the Findlay 2018 SGE BRCA1 dataset. Cross-references the previously verified BRCA1/PTEN cancer-VUS benchmark (Findlay GM et al. 2018 Nature, doi:10.1038/s41586-018-0461-z, PMC6181777)."
      citation_type: cites_as_data_source
    metric:
      name: Spearman rank correlation — BRCT domain
      symbol: rho
      value: 0.534
      unit: null
      aggregation: single
      n_samples: 1262
      tolerance: 0.5
      comparison:
        baseline_value: 0.515
        baseline_source: CLM-RH-005 — full ProteinGym BRCA1 entry (same dataset, broader scope)
        baseline_doi: null
        delta: 0.019
        delta_pct: 3.7
        direction: improvement
        claimed_delta_pct: null
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-005c
    aida: The BRCA1 RING domain achieves Spearman rho 0.409 (N=575, p=1.4×10⁻²⁴) against the Findlay 2018 SGE dataset in the NeuroAutomata cancer-VUS analysis.
    text: "BRCA1 RING domain alone: rho 0.409 (N=575) — a domain-level recomputation from the same Findlay 2018 SGE dataset."
    claim_type: quantitative_metric
    evidence_type: internal_validation
    evidence_strength: moderate
    source:
      reference: "NeuroAutomata cancer-VUS analysis: RING domain Spearman correlation recomputed from the Findlay 2018 SGE BRCA1 dataset. Cross-references the previously verified BRCA1/PTEN cancer-VUS benchmark (Findlay GM et al. 2018 Nature, doi:10.1038/s41586-018-0461-z, PMC6181777)."
      citation_type: cites_as_data_source
    metric:
      name: Spearman rank correlation — RING domain
      symbol: rho
      value: 0.409
      unit: null
      aggregation: single
      n_samples: 575
      tolerance: 0.5
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-006
    aida: NeuroAutomata's ESM-2 validation on calmodulin produced a Spearman correlation of 0.212, indicating poor performance on protein-protein binding assay contexts.
    text: Calmodulin, a calcium-binding protein whose function depends on binding-affinity changes at protein-protein interfaces rather than structural stability, produced a Spearman correlation of 0.212 against experimental data — well below the validation median.
    claim_type: quantitative_metric
    evidence_type: internal_validation
    evidence_strength: moderate
    source:
      reference: "NeuroAutomata internal validation: calmodulin Spearman correlation. Disclosed in the NeuroAutomata documentation set as a known limitation in protein-protein binding assay contexts."
      citation_type: cites_as_data_source
    metric:
      name: Spearman rank correlation
      symbol: rho
      value: 0.212
      unit: null
      aggregation: single
      n_samples: 1
      tolerance: 0.5
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-007
    aida: ESM-2 predictions reflect evolutionary plausibility, not binding energy, and perform poorly on protein-protein binding assay contexts.
    text: ESM-2 scores evolutionary plausibility, not binding energy; protein-protein binding contexts are a known weak spot.
    claim_type: causal
    evidence_type: published_benchmark
    evidence_strength: moderate
    source:
      reference: Meier, J. et al. (2021). Language models enable zero-shot prediction of the effects of mutations on protein function. NeurIPS, 34, 29287–29303.
      doi: 10.48550/arXiv.2110.07588
      citation_type: qualifies
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-008
    aida: The GB1 single-mutant fitness dataset used in NeuroAutomata's benchmark is from Olson, Wu, and Sun (2014), Current Biology, doi:10.1016/j.cub.2014.09.072.
    text: "GB1 single-mutant dataset: Olson CA, Wu NC, Sun R. (2014). A comprehensive biophysical description of pairwise epistasis throughout an entire protein domain. Current Biology, 24(22):2643-51."
    claim_type: existence
    evidence_type: published_benchmark
    evidence_strength: strong
    source:
      reference: Olson CA, Wu NC, Sun R. (2014). A comprehensive biophysical description of pairwise epistasis throughout an entire protein domain. Current Biology, 24(22):2643-51.
      doi: 10.1016/j.cub.2014.09.072
      citation_type: cites_as_data_source
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-009
    aida: Axon Agentic published a blog post documenting the 18-month development of the HPA Multi-Agent System, available at /blog/ai-natural-language-human-protein-atlas-18-month-journey.
    text: The HPA Multi-Agent System translates natural language queries into structured queries against the Human Protein Atlas JSON API. Over 18 months of development, the architecture evolved from a naive RAG baseline through multiple iterations to a verification-first multi-agent pipeline.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic HPA blog post (live on axonagentic.ai).
      url: https://axonagentic.ai/blog/ai-natural-language-human-protein-atlas-18-month-journey
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-010
    aida: Axon Agentic published a validation methodology post for the HPA Multi-Agent System, available at /blog/validation-methodology.
    text: The companion methodology post covers reproducibility protocols, agent role specifications, and the cross-validation procedure used to confirm query results against Human Protein Atlas API responses.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic validation methodology blog post (live on axonagentic.ai).
      url: https://axonagentic.ai/blog/validation-methodology
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-011
    aida: Axon Agentic maintains a publicly linkable machine-readable claims YAML manifest recording every factual claim on public-facing pages, with source citations and verification status, served at https://axonagentic.ai/research/claims.yaml.
    text: Every factual claim on Axon Agentic's public-facing pages is recorded in a structured YAML manifest with its source citation, evidence strength, and verification status.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic public claims manifest, served at https://axonagentic.ai/research/claims.yaml as text/yaml. The manifest aggregates per-page claims YAMLs across public-facing pages.
      url: https://axonagentic.ai/research/claims.yaml
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-012
    aida: Axon Agentic publishes Veritas verification reports for substantive public-facing posts, accessible at /verification/ paths.
    text: Each substantive public-facing post produced by Axon Agentic has a paired Veritas verification report — a fact-check of the quantitative claims and source citations in that piece.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic claims verification pipeline policy and Veritas verification report convention: each substantive public-facing post is paired with a verification report at /verification/<post-slug>."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-013a
    aida: Veritas does not share write access on claim *content* fields with the agents that produce content (Amara, Astro, Kiran, Folio). Bounded write access exists for verdict-record fields per the verification protocol policy codified 2026-05-08.
    text: Veritas operates independently of content-producing agents and cannot edit content produced by other agents.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Axon Agentic verification protocol policy codified 2026-05-08, bounding write-access scopes between content-producing agents and the Veritas verification agent.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-26
    verified_by: veritas
  - id: CLM-RH-013b
    aida: Veritas verification verdicts cannot be overridden by other AI agents; any override requires Jonathan Agoot's explicit written approval.
    text: Veritas findings cannot be overridden by other AI agents without Jonathan Agoot's explicit written approval.
    claim_type: methodological
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic verdict protocol policy codified 2026-04-07: Veritas verdicts cannot be overridden by other AI agents, and any override requires explicit human-operator approval with a written reason."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-013c
    aida: Jonathan Agoot is the sole human operator of Axon Agentic and is responsible for everything the company publishes.
    text: Jonathan Agoot is the sole human operator of Axon Agentic and is responsible for everything it publishes.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic operator and accountability policy: a single human operator is the sole operator of Axon Agentic and is accountable for everything the company publishes."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-014
    aida: NeuroAutomata's privacy policy is publicly accessible at https://neuroautomata.axonagentic.ai/privacy.
    text: NeuroAutomata's privacy policy documents the data practices for the protein analysis platform at neuroautomata.axonagentic.ai.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: Public NeuroAutomata privacy policy at https://neuroautomata.axonagentic.ai/privacy. Status confirmed live by the human operator 2026-05-07.
      url: https://neuroautomata.axonagentic.ai/privacy
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-015
    aida: The NeuroAutomata privacy policy is scoped to the neuroautomata.axonagentic.ai platform and is not an Axon-Agentic-wide privacy policy.
    text: This is an NA-specific policy — it does not constitute a site-wide Axon Agentic privacy policy.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic editorial scoping decision (operator resolution 2026-05-07): the NeuroAutomata privacy policy is scoped to the NeuroAutomata platform and is not an Axon-Agentic-wide policy."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-016
    aida: NeuroAutomata processes protein sequences in-memory and retains no persistent user data.
    text: NeuroAutomata's architecture retains no persistent user data — jobs are processed in-memory and the result returned; no sequence data is stored after job completion.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic NeuroAutomata data-handling policy: zero persistent user data retention; in-memory job processing with no user data stored after job completion."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-017
    aida: NeuroAutomata version 0.16.0 is the current production version as of 2026-05-07.
    text: "Axon Agentic (2026). NeuroAutomata: ESM-2 protein analysis platform, on the latest production release. https://neuroautomata.axonagentic.ai"
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: moderate
    source:
      reference: Axon Agentic NeuroAutomata production version snapshot v0.16.0, confirmed by the human operator 2026-05-07.
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
  - id: CLM-RH-018
    aida: No Axon Agentic AI agent has access to customer data, personal information, or financial systems.
    text: No agent has access to customer data, personal information, or financial systems.
    claim_type: existence
    evidence_type: author_statement
    evidence_strength: strong
    source:
      reference: "Axon Agentic AI agent data-access scope policy: no agent has access to customer data, personal information, or financial systems."
      citation_type: cites_as_evidence
    verification_status: verified
    verified_date: 2026-05-08
    verified_by: veritas
